Publications

Publications about SIMA

If you use SIMA for your research, please cite the following paper in any resulting publications:

Kaifosh P, Zaremba JD, Danielson NB, and Losonczy A. SIMA: Python software for analysis of dynamic fluorescence imaging data. Frontiers in Neuroinformatics. 2014 Aug 27; 8:77. doi: 10.3389/fninf.2014.00077.

Research using SIMA

Feinberg EH, Meister M. Orientation columns in the mouse superior colliculus. Nature. 2014 Dec 17. doi:10.1038/nature14103.

Miller JE, Ayzenshtat I, Carrillo-Reid L, Yuste R. Visual stimuli recruit intrinsically generated cortical ensembles. Proc Natl Acad Sci U S A. 2014 Sep 23;111(38):E4053-61. doi: 10.1073/pnas.1406077111.

Lee SH, Marchionni I, Bezaire M, Varga C, Danielson N, Lovett-Barron M, Losonczy A, Soltesz I. Parvalbumin-positive basket cells differentiate among hippocampal pyramidal cells. Neuron. 2014 Jun 4;82(5):1129-44. doi: 10.1016/j.neuron.2014.03.034.

Lovett-Barron M, Kaifosh P, Kheirbek MA, Danielson N, Zaremba JD, Reardon TR, Turi GF, Hen R, Zemelman BV, Losonczy A. Dendritic inhibition in the hippocampus supports fear learning. Science. 2014 Feb 21;343(6173):857-63. doi: 10.1126/science.1247485.

Kaifosh P, Lovett-Barron M, Turi GF, Reardon TR, Losonczy A. Septo-hippocampal GABAergic signaling across multiple modalities in awake mice. Nat Neurosci. 2013 Sep;16(9):1182-4. doi: 10.1038/nn.3482.

Please email software@losonczylab.org to let us know of any publications that are missing from the above list.